STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_13207Cytochrome P450 4C1; Belongs to the cytochrome P450 family. (424 aa)    
Predicted Functional Partners:
Ocin01_19764
C-5 sterol desaturase; Belongs to the sterol desaturase family.
   
 0.706
Ocin01_00616
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.705
Ocin01_07450
Putative sulfite oxidase, mitochondrial.
     
 0.687
Ocin01_16406
Cytochrome b5 reductase 4; Belongs to the cytochrome b5 family.
    
 0.631
Ocin01_13826
Cytochrome b5 reductase 4.
    
 0.631
Ocin01_09145
7-dehydrocholesterol reductase.
   
 0.631
Ocin01_08039
Cytochrome b5 reductase 4.
    
 0.631
Ocin01_04124
7-dehydrocholesterol reductase.
   
 0.631
Ocin01_04091
Cytochrome b5 reductase 4.
    
 0.631
Ocin01_02507
BRCA1-associated RING domain protein 1.
    
  0.630
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.