STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_13054Uncharacterized protein. (876 aa)    
Predicted Functional Partners:
Ocin01_10388
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.891
Ocin01_04341
Endoplasmic reticulum lectin 1.
   
 0.891
Ocin01_13016
E3 ubiquitin-protein ligase synoviolin B.
   
 0.859
Ocin01_10036
E3 ubiquitin-protein ligase AMFR.
   
 0.859
Ocin01_16644
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.852
Ocin01_03578
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.852
Ocin01_03274
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.852
Ocin01_14398
Spermatogenesis-associated protein 5-like protein 1.
   
 0.808
Ocin01_03737
Spermatogenesis-associated protein 5; Belongs to the AAA ATPase family.
   
 0.808
Ocin01_03206
Cell division control protein 48; Belongs to the AAA ATPase family.
   
 0.808
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.