Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ocin01_00416 | Ocin01_00747 | A0A1D2NLY8 | A0A1D2NKT0 | Splicing factor 3B subunit 1. | Tr-type G domain-containing protein. | 0.993 |
Ocin01_00416 | Ocin01_03081 | A0A1D2NLY8 | A0A1D2NE90 | Splicing factor 3B subunit 1. | Protein painting of fourth. | 0.768 |
Ocin01_00416 | Ocin01_03367 | A0A1D2NLY8 | A0A1D2NDG9 | Splicing factor 3B subunit 1. | Splicing factor 3B subunit 3. | 0.999 |
Ocin01_00416 | Ocin01_06362 | A0A1D2NLY8 | A0A1D2N4X7 | Splicing factor 3B subunit 1. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.774 |
Ocin01_00416 | Ocin01_06535 | A0A1D2NLY8 | A0A1D2N4F4 | Splicing factor 3B subunit 1. | Calcium homeostasis endoplasmic reticulum protein. | 0.999 |
Ocin01_00416 | Ocin01_08051 | A0A1D2NLY8 | A0A1D2N067 | Splicing factor 3B subunit 1. | Pre-mRNA-processing factor 6. | 0.996 |
Ocin01_00416 | Ocin01_12912 | A0A1D2NLY8 | A0A1D2ML86 | Splicing factor 3B subunit 1. | Putative ATP-dependent RNA helicase DDX4. | 0.816 |
Ocin01_00747 | Ocin01_00416 | A0A1D2NKT0 | A0A1D2NLY8 | Tr-type G domain-containing protein. | Splicing factor 3B subunit 1. | 0.993 |
Ocin01_00747 | Ocin01_03081 | A0A1D2NKT0 | A0A1D2NE90 | Tr-type G domain-containing protein. | Protein painting of fourth. | 0.607 |
Ocin01_00747 | Ocin01_03367 | A0A1D2NKT0 | A0A1D2NDG9 | Tr-type G domain-containing protein. | Splicing factor 3B subunit 3. | 0.996 |
Ocin01_00747 | Ocin01_06362 | A0A1D2NKT0 | A0A1D2N4X7 | Tr-type G domain-containing protein. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.668 |
Ocin01_00747 | Ocin01_06535 | A0A1D2NKT0 | A0A1D2N4F4 | Tr-type G domain-containing protein. | Calcium homeostasis endoplasmic reticulum protein. | 0.975 |
Ocin01_00747 | Ocin01_08051 | A0A1D2NKT0 | A0A1D2N067 | Tr-type G domain-containing protein. | Pre-mRNA-processing factor 6. | 0.999 |
Ocin01_00747 | Ocin01_12912 | A0A1D2NKT0 | A0A1D2ML86 | Tr-type G domain-containing protein. | Putative ATP-dependent RNA helicase DDX4. | 0.850 |
Ocin01_03081 | Ocin01_00416 | A0A1D2NE90 | A0A1D2NLY8 | Protein painting of fourth. | Splicing factor 3B subunit 1. | 0.768 |
Ocin01_03081 | Ocin01_00747 | A0A1D2NE90 | A0A1D2NKT0 | Protein painting of fourth. | Tr-type G domain-containing protein. | 0.607 |
Ocin01_03081 | Ocin01_03367 | A0A1D2NE90 | A0A1D2NDG9 | Protein painting of fourth. | Splicing factor 3B subunit 3. | 0.740 |
Ocin01_03081 | Ocin01_08792 | A0A1D2NE90 | A0A1D2MXW8 | Protein painting of fourth. | Enhancer of mRNA-decapping protein 3. | 0.425 |
Ocin01_03081 | Ocin01_10998 | A0A1D2NE90 | A0A1D2MRL1 | Protein painting of fourth. | Protein PAT1 1. | 0.666 |
Ocin01_03081 | Ocin01_12912 | A0A1D2NE90 | A0A1D2ML86 | Protein painting of fourth. | Putative ATP-dependent RNA helicase DDX4. | 0.801 |
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