STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_1246360S ribosomal protein L6. (253 aa)    
Predicted Functional Partners:
Ocin01_17135
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 0.998
Ocin01_13426
60S ribosomal protein L32.
  
 0.998
Ocin01_13441
60S ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 0.998
Ocin01_13045
60S ribosomal protein L7a.
  
 0.998
Ocin01_12825
60S ribosomal protein L29-1.
   
 0.998
Ocin01_12827
60S ribosomal protein L5.
  
 0.998
Ocin01_12835
60S ribosomal protein L7.
  
 0.998
Ocin01_12829
60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
  
 0.998
Ocin01_12531
60S ribosomal protein L34.
  
 0.998
Ocin01_12208
60S ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
  
 0.998
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.