STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_12131WD repeat-containing protein 18. (427 aa)    
Predicted Functional Partners:
Ocin01_13859
Testis-expressed sequence 10 protein.
   
 0.999
Ocin01_11791
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 0.998
Ocin01_03642
Proliferation-associated protein 2G4.
  
 
 0.997
Ocin01_09724
Notchless protein 1.
  
 
 0.994
Ocin01_09072
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
 
 0.992
Ocin01_06936
Heme transporter hrg-1.
   
 0.992
Ocin01_06654
Guanine nucleotide-binding protein-like 3.
   
 0.992
Ocin01_00960
Polynucleotide 5'-hydroxyl-kinase NOL9.
   
 0.991
Ocin01_03830
DNA helicase; Belongs to the MCM family.
   
 
 0.987
Ocin01_03174
Origin recognition complex subunit 2.
    
   0.987
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
Server load: low (20%) [HD]