STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_1212728 kDa inner dynein arm light chain, axonemal. (291 aa)    
Predicted Functional Partners:
Ocin01_03782
Dynein light chain.
   
 0.800
Ocin01_00440
Dynein intermediate chain 3, ciliary.
  
 
 0.789
Ocin01_13766
Dynein light chain.
   
 0.788
Ocin01_05772
Dynein light chain.
   
 0.788
Ocin01_02342
Dynein intermediate chain 3, ciliary.
  
 
 0.788
Ocin01_15051
Dynein light chain 1, axonemal.
  
 
 0.759
Ocin01_03129
Dynein intermediate chain 1, axonemal.
   
 
 0.712
Ocin01_00636
Dynein heavy chain 3, axonemal.
  
  
 0.691
Ocin01_02785
Dynein heavy chain 7, axonemal.
  
  
 0.689
Ocin01_08666
Dynein heavy chain 1, axonemal.
  
  
 0.688
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.