STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_11947Photoreceptor-specific nuclear receptor. (510 aa)    
Predicted Functional Partners:
Ocin01_12764
Pre-mRNA-splicing factor RBM22.
   
 0.804
Ocin01_05339
Arginine-glutamic acid dipeptide repeats protein.
    
 0.786
Ocin01_12673
Nuclear receptor coactivator 2.
    
 0.785
Ocin01_03423
Circadian locomoter output cycles protein kaput.
    
 0.782
Ocin01_05542
Protein cycle.
    
 0.774
Ocin01_02949
Aryl hydrocarbon receptor nuclear translocator.
    
 0.774
Ocin01_02750
Aryl hydrocarbon receptor nuclear translocator-like protein 1.
    
 0.774
Ocin01_00115
Ankyrin repeat family A protein 2.
    
 0.769
Ocin01_09593
Endoplasmin.
   
 0.763
Ocin01_03988
Nuclear receptor corepressor 1.
    
 0.735
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.