STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_11700Poly(A)-specific ribonuclease PARN. (493 aa)    
Predicted Functional Partners:
Ocin01_15175
Poly(A)-specific ribonuclease PARN.
  
  
 
0.811
Ocin01_02917
M7GpppN-mRNA hydrolase.
     
 0.684
Ocin01_06469
Far upstream element-binding protein 3.
    
 0.661
Ocin01_06362
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.630
Ocin01_12748
Exosome complex component RRP46.
     
 0.611
Ocin01_00566
Exosome complex component MTR3.
     
 0.605
Ocin01_00891
Exosome complex component RRP41.
     
 0.597
Ocin01_11503
Exosome complex component RRP42.
     
 0.589
Ocin01_03081
Protein painting of fourth.
    
 0.589
Ocin01_01611
Protein RRP45A.
   
 
 0.572
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.