STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_11674Polypeptide N-acetylgalactosaminyltransferase. (529 aa)    
Predicted Functional Partners:
Ocin01_08201
Xylosyltransferase oxt.
     
 0.839
Ocin01_07710
Polypeptide N-acetylgalactosaminyltransferase.
  
  
0.734
Ocin01_00248
Hexosyltransferase.
     
 0.721
Ocin01_19859
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
     
 0.707
Ocin01_15748
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
     
 0.707
Ocin01_14721
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
     
 0.707
Ocin01_04243
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
     
 0.707
Ocin01_01481
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
     
 0.707
Ocin01_16532
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
     
 0.679
Ocin01_15308
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
     
 0.633
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.