STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_11453Beta-L-arabinobiosidase. (783 aa)    
Predicted Functional Partners:
Ocin01_05589
Integrator complex subunit 9.
    
 0.699
Ocin01_11267
Integrator complex subunit 1.
    
 0.690
Ocin01_04872
Integrator complex subunit 11.
    
 0.689
Ocin01_03139
Integrator complex subunit 3.
    
 0.682
Ocin01_16909
Integrator complex subunit 7.
    
 0.681
Ocin01_07286
Protein asunder.
    
 0.679
Ocin01_01742
Integrator complex subunit 10.
    
 0.668
Ocin01_06903
Integrator complex subunit 4.
    
 0.661
Ocin01_06904
Integrator complex subunit 4.
    
 0.661
Ocin01_09065
PHD finger protein 1.
    
 0.654
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.