STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_11275Partitioning defective protein 6. (316 aa)    
Predicted Functional Partners:
Ocin01_13265
Disks large 5.
    
 0.998
Ocin01_01163
Partitioning defective 3.
    
 0.997
Ocin01_06635
Protein kinase C iota type.
    
 0.992
Ocin01_06634
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.992
Ocin01_02317
Lethal(2) giant larvae protein.
    
 
 0.987
Ocin01_11381
Intersectin-2.
    
 0.951
Ocin01_00052
MAGUK p55 subfamily member 5-A; Belongs to the MAGUK family.
    
0.921
Ocin01_14202
MAGUK p55 subfamily member 7; Belongs to the MAGUK family.
    
0.919
Ocin01_12756
Syntaxin-binding protein 5-like.
    
 
 0.896
Ocin01_12755
Syntaxin-binding protein 5.
    
 
 0.896
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.