Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ocin01_00336 | Ocin01_02614 | A0A1D2NM78 | A0A1D2NFM6 | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Phosphoserine phosphatase. | 0.867 |
Ocin01_00336 | Ocin01_03688 | A0A1D2NM78 | A0A1D2NCM2 | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Cystathionine beta-synthase. | 0.792 |
Ocin01_00336 | Ocin01_05142 | A0A1D2NM78 | A0A1D2N8G2 | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Serine hydroxymethyltransferase, mitochondrial. | 0.883 |
Ocin01_00336 | Ocin01_06736 | A0A1D2NM78 | A0A1D2N3V5 | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid. | 0.748 |
Ocin01_00336 | Ocin01_11279 | A0A1D2NM78 | A0A1D2MQW7 | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Putative acetyltransferase. | 0.796 |
Ocin01_00640 | Ocin01_04122 | A0A1D2NLF5 | A0A1D2NBC0 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.664 |
Ocin01_00640 | Ocin01_05142 | A0A1D2NLF5 | A0A1D2N8G2 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Serine hydroxymethyltransferase, mitochondrial. | 0.723 |
Ocin01_00640 | Ocin01_05359 | A0A1D2NLF5 | A0A1D2N7T7 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | ATP synthase subunit gamma. | 0.999 |
Ocin01_00640 | Ocin01_11279 | A0A1D2NLF5 | A0A1D2MQW7 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Putative acetyltransferase. | 0.747 |
Ocin01_02614 | Ocin01_00336 | A0A1D2NFM6 | A0A1D2NM78 | Phosphoserine phosphatase. | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.867 |
Ocin01_02614 | Ocin01_03688 | A0A1D2NFM6 | A0A1D2NCM2 | Phosphoserine phosphatase. | Cystathionine beta-synthase. | 0.867 |
Ocin01_02614 | Ocin01_05142 | A0A1D2NFM6 | A0A1D2N8G2 | Phosphoserine phosphatase. | Serine hydroxymethyltransferase, mitochondrial. | 0.933 |
Ocin01_02614 | Ocin01_06736 | A0A1D2NFM6 | A0A1D2N3V5 | Phosphoserine phosphatase. | Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid. | 0.804 |
Ocin01_02614 | Ocin01_09285 | A0A1D2NFM6 | A0A1D2MWT8 | Phosphoserine phosphatase. | Cysteine synthase. | 0.816 |
Ocin01_02614 | Ocin01_11279 | A0A1D2NFM6 | A0A1D2MQW7 | Phosphoserine phosphatase. | Putative acetyltransferase. | 0.779 |
Ocin01_03209 | Ocin01_11279 | A0A1D2NDZ8 | A0A1D2MQW7 | annotation not available | Putative acetyltransferase. | 0.780 |
Ocin01_03688 | Ocin01_00336 | A0A1D2NCM2 | A0A1D2NM78 | Cystathionine beta-synthase. | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.792 |
Ocin01_03688 | Ocin01_02614 | A0A1D2NCM2 | A0A1D2NFM6 | Cystathionine beta-synthase. | Phosphoserine phosphatase. | 0.867 |
Ocin01_03688 | Ocin01_05142 | A0A1D2NCM2 | A0A1D2N8G2 | Cystathionine beta-synthase. | Serine hydroxymethyltransferase, mitochondrial. | 0.883 |
Ocin01_03688 | Ocin01_06736 | A0A1D2NCM2 | A0A1D2N3V5 | Cystathionine beta-synthase. | Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid. | 0.748 |
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