STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_10911Zinc transporter ZIP1. (408 aa)    
Predicted Functional Partners:
Ocin01_11122
Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.
    
 0.813
Ocin01_02504
Sorting and assembly machinery component 50.
    
 
 0.656
Ocin01_01319
Sorting and assembly machinery component 50.
    
 
 0.656
Ocin01_01388
Mitochondrial import receptor subunit TOM40 1.
   
 
 0.614
Ocin01_19489
Protein kinase DC2.
    
 0.557
Ocin01_14243
Calcyphosin-like protein.
    
 0.557
Ocin01_13904
Calcium/calmodulin-dependent protein kinase type IV.
    
 0.557
Ocin01_13006
Sperm flagellar protein 1.
    
 0.557
Ocin01_12290
Uncharacterized protein.
    
 0.557
Ocin01_11621
Muscle M-line assembly protein unc-89.
    
 0.557
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.