STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_10613Runt-related transcription factor 1. (204 aa)    
Predicted Functional Partners:
Ocin01_12470
Protein big brother.
    
 0.879
Ocin01_12469
Protein big brother.
    
 0.879
Ocin01_02421
Protein c-ets-1-B.
   
 0.845
Ocin01_02420
ETS-like protein pointed, isoform P2/D.
   
 0.845
Ocin01_01431
CCAAT/enhancer-binding protein beta.
    
 0.824
Ocin01_00714
Cyclic AMP-dependent transcription factor ATF-7.
    
 0.809
Ocin01_02529
DNA-binding protein D-ETS-3.
   
 0.804
Ocin01_02104
Transcriptional coactivator YAP1.
    
 0.802
Ocin01_06324
Protein CBFA2T2.
    
 0.791
Ocin01_04800
ETS translocation variant 1.
   
 0.789
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.