STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_10747Box C/D snoRNA protein 1. (511 aa)    
Predicted Functional Partners:
Ocin01_03361
Nucleolar protein 58.
   
 
 0.922
Ocin01_08907
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.
    
 
 0.703
Ocin01_06124
RNA helicase.
   
  
 0.682
Ocin01_09452
Acyl-protein thioesterase 1.
    
   0.638
Ocin01_04845
Acyl-protein thioesterase 2.
    
   0.638
Ocin01_04339
Lysophospholipase-like protein 1.
    
   0.638
Ocin01_02640
Acyl-protein thioesterase 1.
    
   0.638
Ocin01_11794
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 
 0.634
Ocin01_11920
Nuclear fragile X mental retardation-interacting protein 1.
   
 
 0.630
Ocin01_09576
PIN2/TERF1-interacting telomerase inhibitor 1.
   
    0.616
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.