STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_10612Short-chain dehydrogenase TIC 32, chloroplastic. (417 aa)    
Predicted Functional Partners:
Ocin01_17573
Adrenodoxin, mitochondrial.
   
 0.709
Ocin01_12223
Adrenodoxin, mitochondrial.
   
 0.709
Ocin01_05911
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.709
Ocin01_05000
Adrenodoxin-like protein, mitochondrial.
   
 0.709
Ocin01_00957
Putative malonyl-CoA-acyl carrier protein transacylase, mitochondrial.
  
 0.688
Ocin01_00616
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.673
Ocin01_02938
Sorbitol dehydrogenase.
  
 
 0.669
Ocin01_19517
3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial.
  
 0.668
Ocin01_10953
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.668
Ocin01_07499
Retinal dehydrogenase 1; Belongs to the aldehyde dehydrogenase family.
  
 0.655
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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