STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_10055Speckle-type POZ protein B. (520 aa)    
Predicted Functional Partners:
Ocin01_08633
Cullin-3; Belongs to the cullin family.
   
 0.883
Ocin01_16199
Zinc finger protein-likeGLIS3.
   
 0.832
Ocin01_15169
Transcriptional activator.
   
 0.832
Ocin01_01784
Cullin-1; Belongs to the cullin family.
   
 0.802
Ocin01_01785
Cullin-1; Belongs to the cullin family.
   
 0.802
Ocin01_09174
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.669
Ocin01_17592
RING-box protein 1A.
    
 0.655
Ocin01_05356
Polyubiquitin-A.
    
 0.617
Ocin01_12746
26S protease regulatory subunit 7.
    
  0.613
Ocin01_12454
26S protease regulatory subunit 4; Belongs to the AAA ATPase family.
    
  0.613
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.