STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_09849Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)    
Predicted Functional Partners:
Ocin01_18357
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.999
Ocin01_18330
40S ribosomal protein S19.
   
 
 0.999
Ocin01_17488
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 0.999
Ocin01_17135
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
 0.999
Ocin01_14693
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.999
Ocin01_13680
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.999
Ocin01_13426
60S ribosomal protein L32.
   
 0.999
Ocin01_13441
60S ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family.
  
 0.999
Ocin01_13061
U3 small nucleolar ribonucleoprotein IMP3.
   
 
 0.999
Ocin01_13045
60S ribosomal protein L7a.
   
 0.999
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.