STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_09709Selection and upkeep of intraepithelial T-cells protein 7. (152 aa)    
Predicted Functional Partners:
Ocin01_05483
Neurotrypsin.
    
 0.702
Ocin01_06551
Protein turtle A.
  
  0.677
Ocin01_09139
Peroxidasin.
  
  0.665
Ocin01_15671
Netrin receptor UNC5A.
  
 
  0.662
Ocin01_13968
IgLON family member 5.
  
 
  0.660
Ocin01_03499
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
    
  0.656
Ocin01_03502
Peripheral plasma membrane protein CASK.
    
  0.656
Ocin01_00344
Afadin.
    
 0.651
Ocin01_00341
Afadin.
    
 0.651
Ocin01_00343
Afadin.
    
 0.651
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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