STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_09764Neuronal PAS domain-containing protein 4. (800 aa)    
Predicted Functional Partners:
Ocin01_02949
Aryl hydrocarbon receptor nuclear translocator.
    
 0.998
Ocin01_05542
Protein cycle.
    
 0.966
Ocin01_12673
Nuclear receptor coactivator 2.
    
 0.950
Ocin01_03423
Circadian locomoter output cycles protein kaput.
    
 0.950
Ocin01_02750
Aryl hydrocarbon receptor nuclear translocator-like protein 1.
    
 0.950
Ocin01_11870
U3 small nucleolar RNA-associated protein 15.
   
    0.791
Ocin01_13414
Small integral membrane protein 12-A.
   
    0.790
Ocin01_05128
WD repeat-containing protein 6.
   
    0.790
Ocin01_11794
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
    0.786
Ocin01_08744
Histone chaperone asf1.
   
    0.784
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.