STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_09464Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (441 aa)    
Predicted Functional Partners:
Ocin01_12234
Ras-related protein Rab-11B.
   
 0.995
Ocin01_02084
Ras-related protein Rab6.
   
 0.995
Ocin01_03335
Ras-related protein Rab-9A.
    
 0.994
Ocin01_07376
Ras-related protein Rab-5B.
   
 0.993
Ocin01_16366
Rab5 GDP/GTP exchange factor.
    
 0.992
Ocin01_00205
Ras-related protein Rab-34.
   
 0.972
Ocin01_02502
Rab-like protein 2A.
   
 0.971
Ocin01_15452
Ras-related protein Rab-10.
   
 0.970
Ocin01_08491
Ras-related protein Rab-8A.
   
 0.970
Ocin01_14204
Ras-related protein RAB1BV.
   
 0.968
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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