STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_09386Mitochondrial thiamine pyrophosphate carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family. (378 aa)    
Predicted Functional Partners:
Ocin01_11676
60S ribosomal protein L14.
   
 
 0.843
Ocin01_10769
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 
 0.827
Ocin01_01950
Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial.
     
 0.754
Ocin01_10287
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
     
 0.729
Ocin01_01918
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
 
 0.728
Ocin01_10577
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.715
Ocin01_05201
60S ribosomal protein L28.
   
   0.714
Ocin01_11271
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
   0.711
Ocin01_05206
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 
  0.710
Ocin01_13441
60S ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 
 0.709
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.