STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_09276Nischarin. (457 aa)    
Predicted Functional Partners:
Ocin01_20038
Ras-related protein Rab-14.
   
 0.665
Ocin01_20037
Ras-related protein Rab-14.
   
 0.665
Ocin01_07112
Ras-related protein Rab-14.
   
 0.665
Ocin01_06911
Phosphatidylinositol 3-kinase regulatory subunit alpha.
    
  0.665
Ocin01_00057
Phospholipase D1.
     
 0.657
Ocin01_03335
Ras-related protein Rab-9A.
    
 0.614
Ocin01_12234
Ras-related protein Rab-11B.
    
 0.588
Ocin01_02502
Rab-like protein 2A.
    
 0.588
Ocin01_18306
Ras-related protein Rab-39A.
    
 0.573
Ocin01_14977
Ras-related protein Rab-39B.
    
 0.573
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.