STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_09096Carnitine O-acetyltransferase. (62 aa)    
Predicted Functional Partners:
Ocin01_09051
Peroxisomal multifunctional enzyme type 2.
   
 0.960
Ocin01_03256
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.923
Ocin01_07408
Carnitine O-palmitoyltransferase 2, mitochondrial; Belongs to the carnitine/choline acetyltransferase family.
   
 0.867
Ocin01_02334
Peroxisomal targeting signal 1 receptor.
    
 0.856
Ocin01_06041
Hydroxysteroid dehydrogenase-like protein 2.
   
 0.854
Ocin01_00204
Glycerophosphocholine phosphodiesterase GPCPD1.
     
 0.814
Ocin01_02622
Mitochondrial carnitine/acylcarnitine carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.778
Ocin01_17575
Glycerophosphodiester phosphodiesterase GDPD6.
     
 0.767
Ocin01_10768
Peroxisomal membrane protein PEX14.
    
 0.744
Ocin01_05459
Isovaleryl-CoA dehydrogenase, mitochondrial.
   
 0.734
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.