STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_08922Sphingosine kinase 1. (365 aa)    
Predicted Functional Partners:
Ocin01_00263
Sphingosine-1-phosphate lyase.
  
 0.905
Ocin01_04700
Sphingolipid delta(4)-desaturase DES1; Belongs to the fatty acid desaturase type 1 family. DEGS subfamily.
    
 0.879
Ocin01_06996
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
    
 0.849
Ocin01_19528
Sphingosine-1-phosphate phosphatase 2.
   
 0.840
Ocin01_16065
Sphingosine-1-phosphate phosphatase 1.
   
 0.840
Ocin01_05641
Neutral ceramidase.
    
 0.835
Ocin01_01336
Neutral ceramidase.
    
 0.835
Ocin01_07573
3-ketodihydrosphingosine reductase.
     
 0.822
Ocin01_08201
Xylosyltransferase oxt.
    
 0.821
Ocin01_15278
Putative phosphatidate phosphatase.
   
 0.817
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.