STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_08878Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1033 aa)    
Predicted Functional Partners:
Ocin01_12668
Cell cycle control protein 50A; Belongs to the CDC50/LEM3 family.
   
 0.789
Ocin01_10199
Cell cycle control protein 50A; Belongs to the CDC50/LEM3 family.
   
 0.789
Ocin01_10198
Cell cycle control protein 50A; Belongs to the CDC50/LEM3 family.
   
 0.789
Ocin01_08506
Cell cycle control protein 50A.
   
 0.789
Ocin01_06882
Cell cycle control protein 50B; Belongs to the CDC50/LEM3 family.
   
 0.789
Ocin01_06237
Putative ALA-interacting subunit 4.
   
 0.789
Ocin01_08825
Sodium/potassium-transporting ATPase subunit beta-2.
    
 0.741
Ocin01_05504
Sodium/potassium-transporting ATPase subunit beta-2.
    
 0.741
Ocin01_05043
Sodium/potassium-transporting ATPase subunit beta-2.
    
 0.741
Ocin01_04617
Sodium/potassium-transporting ATPase subunit beta-1.
    
 0.741
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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