STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_08502Amine oxidase. (402 aa)    
Predicted Functional Partners:
Ocin01_07499
Retinal dehydrogenase 1; Belongs to the aldehyde dehydrogenase family.
   
 0.719
Ocin01_05737
Putative aldehyde dehydrogenase family 7 member A1; Belongs to the aldehyde dehydrogenase family.
   
 0.700
Ocin01_14554
Glyoxylate reductase/hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.684
Ocin01_06481
Uncharacterized protein.
     
 0.663
Ocin01_06554
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
     
 0.663
Ocin01_03039
Diamine acetyltransferase 2.
     
 0.656
Ocin01_10700
Aldehyde dehydrogenase, mitochondrial; Belongs to the aldehyde dehydrogenase family.
   
 0.655
Ocin01_12020
Aldehyde dehydrogenase 5, mitochondrial.
   
 0.647
Ocin01_02938
Sorbitol dehydrogenase.
     
 0.647
Ocin01_05143
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
     
 0.643
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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