STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_08687Phenazine biosynthesis-like domain-containing protein. (325 aa)    
Predicted Functional Partners:
Ocin01_11278
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
  0.747
Ocin01_02682
Protein TabA; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
  0.747
Ocin01_17531
Cytosolic non-specific dipeptidase.
    
  0.639
Ocin01_15147
Cytosolic non-specific dipeptidase.
    
  0.639
Ocin01_10426
Cytosolic non-specific dipeptidase.
    
  0.639
Ocin01_09299
Cytosolic non-specific dipeptidase.
    
  0.639
Ocin01_08742
Aminoacylase-1.
    
  0.639
Ocin01_06302
Aminoacylase-1A.
    
  0.639
Ocin01_03671
Aminoacylase-1A.
    
  0.639
Ocin01_15441
Serine-threonine kinase receptor-associated protein.
    
 
 0.493
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.