STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_08488Aspartate aminotransferase. (408 aa)    
Predicted Functional Partners:
Ocin01_11266
Aspartate aminotransferase, mitochondrial.
  
0.977
Ocin01_04342
Malate dehydrogenase.
   
 0.928
Ocin01_10973
Malate dehydrogenase.
   
 0.926
Ocin01_00148
Malate dehydrogenase, mitochondrial.
   
 0.926
Ocin01_04400
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 0.919
Ocin01_02335
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.916
Ocin01_06444
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.910
Ocin01_01928
Putative fumarate hydratase, mitochondrial.
   
 0.907
Ocin01_17106
Glutamate dehydrogenase, mitochondrial.
   
 0.906
Ocin01_15058
Glutamate dehydrogenase, mitochondrial; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.906
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.