STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_08277Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4. (163 aa)    
Predicted Functional Partners:
Ocin01_08278
Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3.
 
     0.918
Ocin01_18195
Voltage-gated potassium channel subunit beta-1.
    
 0.571
Ocin01_15707
Voltage-gated potassium channel subunit beta-3.
    
 0.571
Ocin01_03243
Voltage-gated potassium channel subunit beta-1.
    
 0.571
Ocin01_08385
L-galactose dehydrogenase.
    
 0.562
Ocin01_03419
Lysosomal aspartic protease; Belongs to the peptidase A1 family.
   
 
  0.551
Ocin01_00888
Sodium leak channel non-selective protein.
    
 0.533
Ocin01_08455
Putative lipoyltransferase 2, mitochondrial; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. Belongs to the LipB family.
     
 0.513
Ocin01_19765
Voltage-dependent calcium channel type D subunit alpha-1.
   
 0.469
Ocin01_17378
Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family.
   
 0.469
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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