STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_08259Uncharacterized protein. (406 aa)    
Predicted Functional Partners:
Ocin01_05911
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.550
Ocin01_04882
Phosphatidate phosphatase LPIN2.
      
 0.508
Ocin01_00115
Ankyrin repeat family A protein 2.
    
  0.498
Ocin01_05954
E3 ubiquitin-protein ligase MIB2.
   
 
  0.477
Ocin01_00967
Seipin.
      
 0.414
Ocin01_08083
Uncharacterized protein.
     
 0.401
Ocin01_03720
Hypoxia-inducible factor 1-alpha inhibitor.
      
 0.400
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.