STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_07860Fasciclin-1. (304 aa)    
Predicted Functional Partners:
Ocin01_03390
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial; Belongs to the complex I 49 kDa subunit family.
    
 
 0.886
Ocin01_07861
Fasciclin-1.
 
     0.773
Ocin01_00031
GTP cyclohydrolase 1.
     
 0.641
Ocin01_17767
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.
    
 
 0.584
Ocin01_11639
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.
    
 
 0.584
Ocin01_16431
NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial; Belongs to the complex I 20 kDa subunit family.
    
   0.558
Ocin01_07997
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial; Belongs to the complex I 30 kDa subunit family.
    
   0.558
Ocin01_18816
Alkaline phosphatase.
     
 0.454
Ocin01_13064
Membrane-bound alkaline phosphatase; Belongs to the alkaline phosphatase family.
     
 0.454
Ocin01_07946
Alkaline phosphatase.
     
 0.454
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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