STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_07274Myosin light chain alkali. (159 aa)    
Predicted Functional Partners:
Ocin01_03808
Troponin I.
   
 0.978
Ocin01_02528
Paramyosin, short form.
   
 0.977
Ocin01_04766
Myosin regulatory light chain 2.
  
 0.934
Ocin01_14702
Myosin heavy chain, muscle; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.932
Ocin01_14033
Myosin heavy chain, muscle; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.932
Ocin01_11045
Myosin heavy chain, muscle; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.932
Ocin01_07318
Myosin heavy chain, muscle; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.932
Ocin01_10187
Calponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity.
   
 0.911
Ocin01_16831
Myosin regulatory light chain sqh.
   
 0.908
Ocin01_03499
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
    
 0.895
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.