STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_07368Uncharacterized protein. (172 aa)    
Predicted Functional Partners:
Ocin01_10190
Putative dynactin subunit 2.
   
 0.998
Ocin01_01789
Dynactin subunit 6.
    
 0.998
Ocin01_01669
Dynactin subunit 1.
   
 0.998
Ocin01_11306
Dynactin subunit 4.
    
 0.996
Ocin01_02134
Actin-related protein 10; Belongs to the actin family.
    
 0.993
Ocin01_11280
Dynactin subunit 5.
   
 0.991
Ocin01_15198
Beta-centractin; Belongs to the actin family.
    
 0.977
Ocin01_00080
Beta-centractin.
    
 0.977
Ocin01_07876
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 0.975
Ocin01_10514
Cytoplasmic dynein 1 intermediate chain 2.
    
 0.958
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.