STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_07469Exosome component 10. (924 aa)    
Predicted Functional Partners:
Ocin01_14544
U3 small nucleolar RNA-associated protein 14 A.
   
  0.999
Ocin01_08441
Nuclear nucleic acid-binding protein C1D.
   
 0.999
Ocin01_00769
Exosome complex component CSL4.
   
 0.999
Ocin01_13483
Ribosome biogenesis protein bms1.
   
 0.998
Ocin01_12748
Exosome complex component RRP46.
   
 0.998
Ocin01_11503
Exosome complex component RRP42.
   
 0.998
Ocin01_09422
Uncharacterized protein.
   
 0.998
Ocin01_07565
Something about silencing protein 10.
   
 0.998
Ocin01_01611
Protein RRP45A.
   
 0.998
Ocin01_00891
Exosome complex component RRP41.
   
 0.998
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.