STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_07097Zinc finger MYND domain-containing protein 11. (690 aa)    
Predicted Functional Partners:
Ocin01_11267
Integrator complex subunit 1.
    
   0.660
Ocin01_03139
Integrator complex subunit 3.
    
   0.660
Ocin01_11933
Protein EMSY.
    
 
 0.586
Ocin01_05807
Drebrin-like protein.
    
   0.559
Ocin01_00877
Integrator complex subunit 6-A.
    
   0.544
Ocin01_10498
Uncharacterized protein.
    
 
 0.497
Ocin01_15009
Eukaryotic translation initiation factor 4E transporter.
    
 
 0.485
Ocin01_00475
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1.
    
 
 0.457
Ocin01_01681
Transcriptional repressor p66-alpha.
    
 
 0.439
Ocin01_00747
Tr-type G domain-containing protein.
    
 
 0.422
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.