STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_07081Dynein heavy chain 12, axonemal. (707 aa)    
Predicted Functional Partners:
Ocin01_10889
Dynein light chain Tctex-type 1.
    
 0.830
Ocin01_01669
Dynactin subunit 1.
   
 0.816
Ocin01_13766
Dynein light chain.
    
 0.809
Ocin01_05772
Dynein light chain.
    
 0.809
Ocin01_10190
Putative dynactin subunit 2.
    
 0.808
Ocin01_03805
WD repeat-containing protein 78.
  
 0.806
Ocin01_17141
Lissencephaly-1 A.
    
 0.802
Ocin01_11095
Lissencephaly-1.
    
 0.802
Ocin01_03782
Dynein light chain.
    
 0.792
Ocin01_03129
Dynein intermediate chain 1, axonemal.
   
 0.789
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.