STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_06925CAAX prenyl protease 2. (287 aa)    
Predicted Functional Partners:
Ocin01_03344
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
    
 0.914
Ocin01_00523
Protein-S-isoprenylcysteine O-methyltransferase.
   
 0.912
Ocin01_20095
CAAX prenyl protease 1.
    
 0.850
Ocin01_18679
CAAX prenyl protease 1.
    
 0.850
Ocin01_16932
CAAX prenyl protease 1.
    
 0.850
Ocin01_15170
CAAX prenyl protease 1.
    
 0.850
Ocin01_11399
CAAX prenyl protease 1.
    
 0.850
Ocin01_09203
CAAX prenyl protease 1.
    
 0.850
Ocin01_09202
CAAX prenyl protease 1.
    
 0.850
Ocin01_15174
CAAX prenyl protease 1.
    
 0.845
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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