STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_06890Bifunctional nitrilase/nitrile hydratase NIT4B. (352 aa)    
Predicted Functional Partners:
Ocin01_18376
Apoptosis-inducing factor 3.
   
 
 0.815
Ocin01_08455
Putative lipoyltransferase 2, mitochondrial; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. Belongs to the LipB family.
     
 0.773
Ocin01_05737
Putative aldehyde dehydrogenase family 7 member A1; Belongs to the aldehyde dehydrogenase family.
   
 0.770
Ocin01_02335
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.770
Ocin01_09354
Rieske domain-containing protein.
   
 
 0.767
Ocin01_02938
Sorbitol dehydrogenase.
  
 0.753
Ocin01_10287
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
    
 0.752
Ocin01_17106
Glutamate dehydrogenase, mitochondrial.
  
 
 0.750
Ocin01_15058
Glutamate dehydrogenase, mitochondrial; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.750
Ocin01_09862
Putative allantoinase 1.
  
 
 0.742
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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