Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ocin01_02455 | Ocin01_06525 | A0A1D2NG56 | A0A1D2N4F1 | Ubiquitin-like modifier-activating enzyme 5. | E3 ubiquitin-protein ligase TRIP12. | 0.999 |
Ocin01_02455 | Ocin01_06577 | A0A1D2NG56 | A0A1D2N598 | Ubiquitin-like modifier-activating enzyme 5. | Uncharacterized protein. | 0.574 |
Ocin01_02455 | Ocin01_06855 | A0A1D2NG56 | A0A1D2N3H5 | Ubiquitin-like modifier-activating enzyme 5. | Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy. | 0.812 |
Ocin01_02455 | Ocin01_08148 | A0A1D2NG56 | A0A1D2MZW9 | Ubiquitin-like modifier-activating enzyme 5. | Uncharacterized protein. | 0.850 |
Ocin01_02455 | Ocin01_15149 | A0A1D2NG56 | A0A1D2MET8 | Ubiquitin-like modifier-activating enzyme 5. | Ubiquitin-like modifier-activating enzyme 1; Belongs to the ubiquitin-activating E1 family. | 0.853 |
Ocin01_03558 | Ocin01_06577 | A0A1D2NCY0 | A0A1D2N598 | Ubiquitin carboxyl-terminal hydrolase 32; Belongs to the peptidase C19 family. | Uncharacterized protein. | 0.755 |
Ocin01_06525 | Ocin01_02455 | A0A1D2N4F1 | A0A1D2NG56 | E3 ubiquitin-protein ligase TRIP12. | Ubiquitin-like modifier-activating enzyme 5. | 0.999 |
Ocin01_06525 | Ocin01_06577 | A0A1D2N4F1 | A0A1D2N598 | E3 ubiquitin-protein ligase TRIP12. | Uncharacterized protein. | 0.658 |
Ocin01_06525 | Ocin01_06855 | A0A1D2N4F1 | A0A1D2N3H5 | E3 ubiquitin-protein ligase TRIP12. | Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy. | 0.969 |
Ocin01_06525 | Ocin01_08148 | A0A1D2N4F1 | A0A1D2MZW9 | E3 ubiquitin-protein ligase TRIP12. | Uncharacterized protein. | 0.980 |
Ocin01_06525 | Ocin01_14699 | A0A1D2N4F1 | A0A1D2MG85 | E3 ubiquitin-protein ligase TRIP12. | Ubiquitin-associated domain-containing protein 1. | 0.618 |
Ocin01_06525 | Ocin01_15149 | A0A1D2N4F1 | A0A1D2MET8 | E3 ubiquitin-protein ligase TRIP12. | Ubiquitin-like modifier-activating enzyme 1; Belongs to the ubiquitin-activating E1 family. | 0.995 |
Ocin01_06577 | Ocin01_02455 | A0A1D2N598 | A0A1D2NG56 | Uncharacterized protein. | Ubiquitin-like modifier-activating enzyme 5. | 0.574 |
Ocin01_06577 | Ocin01_03558 | A0A1D2N598 | A0A1D2NCY0 | Uncharacterized protein. | Ubiquitin carboxyl-terminal hydrolase 32; Belongs to the peptidase C19 family. | 0.755 |
Ocin01_06577 | Ocin01_06525 | A0A1D2N598 | A0A1D2N4F1 | Uncharacterized protein. | E3 ubiquitin-protein ligase TRIP12. | 0.658 |
Ocin01_06577 | Ocin01_06855 | A0A1D2N598 | A0A1D2N3H5 | Uncharacterized protein. | Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy. | 0.574 |
Ocin01_06577 | Ocin01_07480 | A0A1D2N598 | A0A1D2N1S8 | Uncharacterized protein. | Ubiquitin carboxyl-terminal hydrolase 43; Belongs to the peptidase C19 family. | 0.755 |
Ocin01_06577 | Ocin01_08148 | A0A1D2N598 | A0A1D2MZW9 | Uncharacterized protein. | Uncharacterized protein. | 0.574 |
Ocin01_06577 | Ocin01_13457 | A0A1D2N598 | A0A1D2MJM1 | Uncharacterized protein. | Ubiquitin carboxyl-terminal hydrolase 11; Belongs to the peptidase C19 family. | 0.687 |
Ocin01_06577 | Ocin01_14699 | A0A1D2N598 | A0A1D2MG85 | Uncharacterized protein. | Ubiquitin-associated domain-containing protein 1. | 0.943 |
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