STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_06577Uncharacterized protein. (1459 aa)    
Predicted Functional Partners:
Ocin01_14699
Ubiquitin-associated domain-containing protein 1.
   
 
 0.943
Ocin01_07480
Ubiquitin carboxyl-terminal hydrolase 43; Belongs to the peptidase C19 family.
   
 0.755
Ocin01_03558
Ubiquitin carboxyl-terminal hydrolase 32; Belongs to the peptidase C19 family.
   
 0.755
Ocin01_19278
Ubiquitin carboxyl-terminal hydrolase.
   
 0.717
Ocin01_13457
Ubiquitin carboxyl-terminal hydrolase 11; Belongs to the peptidase C19 family.
   
 0.687
Ocin01_06525
E3 ubiquitin-protein ligase TRIP12.
    
  0.658
Ocin01_08148
Uncharacterized protein.
     
 0.574
Ocin01_06855
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
     
 0.574
Ocin01_02455
Ubiquitin-like modifier-activating enzyme 5.
     
 0.574
Ocin01_15149
Ubiquitin-like modifier-activating enzyme 1; Belongs to the ubiquitin-activating E1 family.
     
 0.570
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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