STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_06135Type II inositol 1,4,5-trisphosphate 5-phosphatase. (728 aa)    
Predicted Functional Partners:
Ocin01_02624
Sesquipedalian-1.
    
 
 0.977
Ocin01_02788
Phosphatidylinositide phosphatase SAC1.
 
  
 0.966
Ocin01_01772
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.910
Ocin01_07376
Ras-related protein Rab-5B.
    
 0.879
Ocin01_09362
Type II inositol 3,4-bisphosphate 4-phosphatase.
     
 0.859
Ocin01_12844
Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha; Belongs to the PI3/PI4-kinase family.
     
 0.854
Ocin01_12324
Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
     
 0.833
Ocin01_06111
Synaptojanin-1.
    
0.823
Ocin01_06911
Phosphatidylinositol 3-kinase regulatory subunit alpha.
    
 0.822
Ocin01_10088
1-phosphatidylinositol 3-phosphate 5-kinase.
     
 0.820
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.