STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_05943Long-chain fatty acid transport protein 4. (384 aa)    
Predicted Functional Partners:
Ocin01_03256
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.823
Ocin01_10721
Bardet-Biedl syndrome 1 protein.
   
 0.822
Ocin01_10714
Bardet-Biedl syndrome 7 protein.
    
 0.818
Ocin01_09858
Bardet-Biedl syndrome 4 protein.
    
 0.810
Ocin01_00667
Tetratricopeptide repeat protein 8.
    
 0.802
Ocin01_04440
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.753
Ocin01_17195
Kinesin-5.
    
 0.744
Ocin01_04439
Kinesin-like calmodulin-binding protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.744
Ocin01_16590
Leucine zipper transcription factor-like protein 1.
    
 0.688
Ocin01_00115
Ankyrin repeat family A protein 2.
    
 0.676
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.