Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ocin01_00562 | Ocin01_01358 | A0A1D2NMH2 | A0A1D2NJB1 | Nuclear distribution protein nudE-like 1. | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.592 |
Ocin01_00562 | Ocin01_03478 | A0A1D2NMH2 | A0A1D2ND51 | Nuclear distribution protein nudE-like 1. | Peptidyl-prolyl cis-trans isomerase. | 0.515 |
Ocin01_00562 | Ocin01_05513 | A0A1D2NMH2 | A0A1D2N7E0 | Nuclear distribution protein nudE-like 1. | NudC domain-containing protein 3. | 0.722 |
Ocin01_00562 | Ocin01_05850 | A0A1D2NMH2 | A0A1D2N6F2 | Nuclear distribution protein nudE-like 1. | Mitotic checkpoint serine/threonine-protein kinase BUB1 beta. | 0.657 |
Ocin01_00562 | Ocin01_10514 | A0A1D2NMH2 | A0A1D2MSW0 | Nuclear distribution protein nudE-like 1. | Cytoplasmic dynein 1 intermediate chain 2. | 0.774 |
Ocin01_00562 | Ocin01_11095 | A0A1D2NMH2 | A0A1D2MRB6 | Nuclear distribution protein nudE-like 1. | Lissencephaly-1. | 0.934 |
Ocin01_00562 | Ocin01_17141 | A0A1D2NMH2 | A0A1D2M9D2 | Nuclear distribution protein nudE-like 1. | Lissencephaly-1 A. | 0.981 |
Ocin01_01358 | Ocin01_00562 | A0A1D2NJB1 | A0A1D2NMH2 | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | Nuclear distribution protein nudE-like 1. | 0.592 |
Ocin01_01358 | Ocin01_05513 | A0A1D2NJB1 | A0A1D2N7E0 | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | NudC domain-containing protein 3. | 0.695 |
Ocin01_01358 | Ocin01_05850 | A0A1D2NJB1 | A0A1D2N6F2 | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | Mitotic checkpoint serine/threonine-protein kinase BUB1 beta. | 0.602 |
Ocin01_01358 | Ocin01_10514 | A0A1D2NJB1 | A0A1D2MSW0 | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | Cytoplasmic dynein 1 intermediate chain 2. | 0.993 |
Ocin01_01358 | Ocin01_11095 | A0A1D2NJB1 | A0A1D2MRB6 | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | Lissencephaly-1. | 0.827 |
Ocin01_01358 | Ocin01_17141 | A0A1D2NJB1 | A0A1D2M9D2 | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | Lissencephaly-1 A. | 0.893 |
Ocin01_03346 | Ocin01_03478 | A0A1D2NDK6 | A0A1D2ND51 | CLIP-associating protein 1. | Peptidyl-prolyl cis-trans isomerase. | 0.510 |
Ocin01_03346 | Ocin01_05513 | A0A1D2NDK6 | A0A1D2N7E0 | CLIP-associating protein 1. | NudC domain-containing protein 3. | 0.659 |
Ocin01_03346 | Ocin01_05850 | A0A1D2NDK6 | A0A1D2N6F2 | CLIP-associating protein 1. | Mitotic checkpoint serine/threonine-protein kinase BUB1 beta. | 0.778 |
Ocin01_03346 | Ocin01_10514 | A0A1D2NDK6 | A0A1D2MSW0 | CLIP-associating protein 1. | Cytoplasmic dynein 1 intermediate chain 2. | 0.403 |
Ocin01_03346 | Ocin01_17141 | A0A1D2NDK6 | A0A1D2M9D2 | CLIP-associating protein 1. | Lissencephaly-1 A. | 0.402 |
Ocin01_03478 | Ocin01_00562 | A0A1D2ND51 | A0A1D2NMH2 | Peptidyl-prolyl cis-trans isomerase. | Nuclear distribution protein nudE-like 1. | 0.515 |
Ocin01_03478 | Ocin01_03346 | A0A1D2ND51 | A0A1D2NDK6 | Peptidyl-prolyl cis-trans isomerase. | CLIP-associating protein 1. | 0.510 |
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