Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ocin01_03434 | Ocin01_05470 | A0A1D2NDD1 | A0A1D2N7H3 | Coiled-coil domain-containing protein 51. | Transcriptional-regulating factor 1. | 0.524 |
Ocin01_05470 | Ocin01_03434 | A0A1D2N7H3 | A0A1D2NDD1 | Transcriptional-regulating factor 1. | Coiled-coil domain-containing protein 51. | 0.524 |
Ocin01_05470 | Ocin01_06967 | A0A1D2N7H3 | A0A1D2N358 | Transcriptional-regulating factor 1. | Ribosomal protein S6 kinase delta-1. | 0.406 |
Ocin01_05470 | Ocin01_07054 | A0A1D2N7H3 | A0A1D2N2Y7 | Transcriptional-regulating factor 1. | Mesoderm induction early response protein 1. | 0.526 |
Ocin01_05470 | Ocin01_11075 | A0A1D2N7H3 | A0A1D2MRI5 | Transcriptional-regulating factor 1. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.404 |
Ocin01_05470 | Ocin01_13657 | A0A1D2N7H3 | A0A1D2MJ42 | Transcriptional-regulating factor 1. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.404 |
Ocin01_05470 | Ocin01_17688 | A0A1D2N7H3 | A0A1D2M7U8 | Transcriptional-regulating factor 1. | Histone deacetylase 1. | 0.404 |
Ocin01_05470 | Ocin01_20240 | A0A1D2N7H3 | A0A1D2M0C0 | Transcriptional-regulating factor 1. | Histone deacetylase Rpd3. | 0.404 |
Ocin01_06967 | Ocin01_05470 | A0A1D2N358 | A0A1D2N7H3 | Ribosomal protein S6 kinase delta-1. | Transcriptional-regulating factor 1. | 0.406 |
Ocin01_07054 | Ocin01_05470 | A0A1D2N2Y7 | A0A1D2N7H3 | Mesoderm induction early response protein 1. | Transcriptional-regulating factor 1. | 0.526 |
Ocin01_07054 | Ocin01_11075 | A0A1D2N2Y7 | A0A1D2MRI5 | Mesoderm induction early response protein 1. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.685 |
Ocin01_07054 | Ocin01_13657 | A0A1D2N2Y7 | A0A1D2MJ42 | Mesoderm induction early response protein 1. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.685 |
Ocin01_07054 | Ocin01_17688 | A0A1D2N2Y7 | A0A1D2M7U8 | Mesoderm induction early response protein 1. | Histone deacetylase 1. | 0.685 |
Ocin01_07054 | Ocin01_20240 | A0A1D2N2Y7 | A0A1D2M0C0 | Mesoderm induction early response protein 1. | Histone deacetylase Rpd3. | 0.685 |
Ocin01_11075 | Ocin01_05470 | A0A1D2MRI5 | A0A1D2N7H3 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | Transcriptional-regulating factor 1. | 0.404 |
Ocin01_11075 | Ocin01_07054 | A0A1D2MRI5 | A0A1D2N2Y7 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | Mesoderm induction early response protein 1. | 0.685 |
Ocin01_13657 | Ocin01_05470 | A0A1D2MJ42 | A0A1D2N7H3 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | Transcriptional-regulating factor 1. | 0.404 |
Ocin01_13657 | Ocin01_07054 | A0A1D2MJ42 | A0A1D2N2Y7 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | Mesoderm induction early response protein 1. | 0.685 |
Ocin01_17688 | Ocin01_05470 | A0A1D2M7U8 | A0A1D2N7H3 | Histone deacetylase 1. | Transcriptional-regulating factor 1. | 0.404 |
Ocin01_17688 | Ocin01_07054 | A0A1D2M7U8 | A0A1D2N2Y7 | Histone deacetylase 1. | Mesoderm induction early response protein 1. | 0.685 |
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