STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_05455Myosin light chain kinase, smooth muscle. (1661 aa)    
Predicted Functional Partners:
Ocin01_05476
Uncharacterized protein.
    
 0.909
Ocin01_11621
Muscle M-line assembly protein unc-89.
    
0.834
Ocin01_12131
WD repeat-containing protein 18.
   
 0.798
Ocin01_00030
Tyrosine-protein kinase-like otk; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 0.793
Ocin01_05911
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.728
Ocin01_01636
60S ribosomal protein L30.
    
 0.715
Ocin01_07399
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.714
Ocin01_15018
Vitrin.
    
 0.713
Ocin01_17671
PiggyBac transposable element-derived protein 4.
   
  0.712
Ocin01_11304
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
  0.712
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.