STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_05060DNA-binding protein RFX2. (1141 aa)    
Predicted Functional Partners:
Ocin01_03204
Serine/threonine-protein kinase atr; Belongs to the PI3/PI4-kinase family.
    
 
 0.899
Ocin01_01506
Tonsoku-like protein.
    
 0.855
Ocin01_02757
Serine/threonine-protein kinase DCLK2.
     
 0.817
Ocin01_05867
Ankyrin repeat family A protein 2.
    
 0.808
Ocin01_00560
ANK_REP_REGION domain-containing protein.
    
 0.808
Ocin01_04237
Leucine-rich repeat-containing protein 34.
    
 0.675
Ocin01_08897
Leucine-rich repeat-containing protein 45.
    
  0.658
Ocin01_01745
Leucine-rich repeat-containing protein 74B.
    
  0.658
Ocin01_11051
Forkhead box protein J1.2.
    
 
 0.648
Ocin01_02060
Uncharacterized protein.
    
   0.563
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.