STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_05054Copine-1. (244 aa)    
Predicted Functional Partners:
Ocin01_09304
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.600
Ocin01_06481
Uncharacterized protein.
     
 0.593
Ocin01_12324
Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
     
 0.570
Ocin01_02788
Phosphatidylinositide phosphatase SAC1.
     
 0.569
Ocin01_04879
N-terminal Xaa-Pro-Lys N-methyltransferase 1.
   
 
 0.563
Ocin01_12589
EF-hand domain-containing protein D2.
   
 
  0.546
Ocin01_12536
Myotubularin-related protein 2.
     
 0.536
Ocin01_06421
Myotubularin-related protein 3.
     
 0.536
Ocin01_13240
Fibroblast growth factor receptor 3.
    
  0.535
Ocin01_07876
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
     
 0.530
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.