STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_04829Transmembrane protein. (316 aa)    
Predicted Functional Partners:
Ocin01_03727
B9 domain-containing protein 2.
   
 
 0.840
Ocin01_04957
B9 domain-containing protein 1.
   
 
 0.829
Ocin01_01136
Coiled-coil and C2 domain-containing protein 2A.
    
 
 0.712
Ocin01_05933
Meckel syndrome type 1 protein.
    
 
 0.665
Ocin01_03793
Transmembrane protein.
   
 
 0.614
Ocin01_14915
Meckelin.
   
  
 0.584
Ocin01_07664
Transmembrane protein.
    
 
 0.580
Ocin01_01973
Jouberin.
      
 0.517
Ocin01_14463
Intraflagellar transport protein 57.
  
   
 0.500
Ocin01_03101
Putative inositol monophosphatase 3.
      
 0.493
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.