Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ocin01_01035 | Ocin01_04131 | A0A1D2NK37 | A0A1D2NBU4 | E3 ubiquitin-protein ligase HUWE1. | E3 ubiquitin-protein ligase. | 0.919 |
Ocin01_01035 | Ocin01_04856 | A0A1D2NK37 | A0A1D2N9C9 | E3 ubiquitin-protein ligase HUWE1. | E3 ubiquitin-protein ligase. | 0.922 |
Ocin01_01035 | Ocin01_05356 | A0A1D2NK37 | A0A1D2N8C3 | E3 ubiquitin-protein ligase HUWE1. | Polyubiquitin-A. | 0.932 |
Ocin01_01035 | Ocin01_09477 | A0A1D2NK37 | A0A1D2MX08 | E3 ubiquitin-protein ligase HUWE1. | Ubiquitin-60S ribosomal protein L40. | 0.842 |
Ocin01_01035 | Ocin01_11386 | A0A1D2NK37 | A0A1D2MQM4 | E3 ubiquitin-protein ligase HUWE1. | Ubiquitin-60S ribosomal protein L40. | 0.719 |
Ocin01_04131 | Ocin01_01035 | A0A1D2NBU4 | A0A1D2NK37 | E3 ubiquitin-protein ligase. | E3 ubiquitin-protein ligase HUWE1. | 0.919 |
Ocin01_04131 | Ocin01_04856 | A0A1D2NBU4 | A0A1D2N9C9 | E3 ubiquitin-protein ligase. | E3 ubiquitin-protein ligase. | 0.881 |
Ocin01_04131 | Ocin01_05356 | A0A1D2NBU4 | A0A1D2N8C3 | E3 ubiquitin-protein ligase. | Polyubiquitin-A. | 0.973 |
Ocin01_04131 | Ocin01_06089 | A0A1D2NBU4 | A0A1D2N5Q2 | E3 ubiquitin-protein ligase. | TNF receptor-associated factor 6. | 0.874 |
Ocin01_04131 | Ocin01_07481 | A0A1D2NBU4 | A0A1D2N1U4 | E3 ubiquitin-protein ligase. | Ubiquitin-conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family. | 0.652 |
Ocin01_04131 | Ocin01_09477 | A0A1D2NBU4 | A0A1D2MX08 | E3 ubiquitin-protein ligase. | Ubiquitin-60S ribosomal protein L40. | 0.960 |
Ocin01_04131 | Ocin01_09956 | A0A1D2NBU4 | A0A1D2MUY4 | E3 ubiquitin-protein ligase. | TNF receptor-associated factor 6. | 0.874 |
Ocin01_04131 | Ocin01_10484 | A0A1D2NBU4 | A0A1D2MTG1 | E3 ubiquitin-protein ligase. | Protein patched. | 0.880 |
Ocin01_04131 | Ocin01_11386 | A0A1D2NBU4 | A0A1D2MQM4 | E3 ubiquitin-protein ligase. | Ubiquitin-60S ribosomal protein L40. | 0.947 |
Ocin01_04131 | Ocin01_15010 | A0A1D2NBU4 | A0A1D2MFI4 | E3 ubiquitin-protein ligase. | Ubiquitin-conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family. | 0.652 |
Ocin01_04856 | Ocin01_01035 | A0A1D2N9C9 | A0A1D2NK37 | E3 ubiquitin-protein ligase. | E3 ubiquitin-protein ligase HUWE1. | 0.922 |
Ocin01_04856 | Ocin01_04131 | A0A1D2N9C9 | A0A1D2NBU4 | E3 ubiquitin-protein ligase. | E3 ubiquitin-protein ligase. | 0.881 |
Ocin01_04856 | Ocin01_05356 | A0A1D2N9C9 | A0A1D2N8C3 | E3 ubiquitin-protein ligase. | Polyubiquitin-A. | 0.973 |
Ocin01_04856 | Ocin01_06089 | A0A1D2N9C9 | A0A1D2N5Q2 | E3 ubiquitin-protein ligase. | TNF receptor-associated factor 6. | 0.912 |
Ocin01_04856 | Ocin01_07481 | A0A1D2N9C9 | A0A1D2N1U4 | E3 ubiquitin-protein ligase. | Ubiquitin-conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family. | 0.902 |
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