STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_04789Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. (165 aa)    
Predicted Functional Partners:
Ocin01_11470
Signal peptidase complex subunit 1.
   
 0.991
Ocin01_03451
Signal peptidase complex catalytic subunit SEC11.
   
 0.987
Ocin01_09357
Signal peptidase complex subunit 3.
   
 0.970
Ocin01_00613
Signal peptidase complex subunit 3.
   
 0.970
Ocin01_09360
Mitochondrial inner membrane protease subunit 1.
   
 0.878
Ocin01_08271
Integrin-alpha FG-GAP repeat-containing protein 2.
   
 0.878
Ocin01_00579
Mitochondrial inner membrane protease subunit.
   
 0.878
Ocin01_05459
Isovaleryl-CoA dehydrogenase, mitochondrial.
     
 0.796
Ocin01_02956
Translocation protein SEC63.
    
 
 0.686
Ocin01_03338
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
   
    0.615
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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